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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Break point
Rice chromosome 10
Rice chromosome 10
Rice chromosome 5
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 1D
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
8 Bin assignment
2 Bin assignment(level2)
6 Break point
2 Break point
2 Rice chromosome 10
1 Rice chromosome 10
4 Rice chromosome 5
25 Total

Map Features

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Items 1 to 25 of 25.
Wheat - Physical Bin Map - 1D
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
1DS-5 0.70 Break point -70.00 No other positions
1DS-1 0.59 Break point -59.00 No other positions
7BL-7/1DS-3 0.48 Break point -48.00 No other positions
1DL-4 0.18 Break point 18.00 No other positions
1DL-2 0.41 Break point 41.00 No other positions
1DS5-0.70-1.00 Bin assignment -100.00 - -70.00 No other positions
1DS1-0.59-0.70 Bin assignment -70.00 - -59.00 No other positions
1DS3-0.48-0.59 Bin assignment -59.00 - -48.00 No other positions
C-1DS3-0.48 Bin assignment -48.00 - 0.00 Wheat - SSR Loci (2005) - 1D Xbarc152 Marker 25.10 (cM) Automated name-based View Maps
C1D Bin assignment -5.00 - 5.00 No other positions
C-1DL4-0.18 Bin assignment 0.00 - 18.00 Wheat - SSR Loci (2005) - 1D Xbarc169 Marker 61.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 1D Xbarc99 Marker 53.30 (cM) Automated name-based View Maps
1DL4-0.18-0.41 Bin assignment 18.00 - 41.00 No other positions
1DL2-0.41-1.00 Bin assignment 41.00 - 100.00 No other positions
1DS-2 0.57 Break point -57.00 No other positions
1DS2-0.57-0.0.59 Bin assignment(level2) -59.00 - -57.00 No other positions
1DL-3 0.25 Break point 25.00 No other positions
1DL3 0.25-0.41 Bin assignment(level2) 25.00 - 41.00 Wheat - SSR Loci (2005) - 1D Xbarc66 Marker 99.40 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr 5 Rice chromosome 5 -100.00 - -70.00 No other positions
rice chr 5 Rice chromosome 5 -70.00 - -59.00 No other positions
rice chr 5 Rice chromosome 5 -48.00 - -5.00 No other positions
rice chr10 Rice chromosome 10 5.00 - 18.00 No other positions
rice chr10 Rice chromosome 10 18.00 - 41.00 No other positions
rice chr 5 Rice chromosome 5 41.00 - 100.00 No other positions
rice chr10 Rice chromosome 10 41.00 - 100.00 No other positions