CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Bin assignment(level3)
Break point
Rice chromosome 4
Rice chromosome 7
Rice chromosome 7
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 2B
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
9 Bin assignment
6 Bin assignment(level2)
2 Bin assignment(level3)
7 Break point
5 Rice chromosome 4
2 Rice chromosome 7
1 Rice chromosome 7
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Wheat - Physical Bin Map - 2B
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
2BS-3 0.84 Break point -84.00 No other positions
2BS-4 0.75 Break point -75.00 No other positions
2BS-1 0.53 Break point -53.00 No other positions
2BL-2 0.36 Break point 36.00 No other positions
2BS-4/2BL4 0.50 Break point 50.00 No other positions
2BL-6 0.89 Break point 89.00 No other positions
2BS3-0.84-1.00 Bin assignment -100.00 - -84.00 No other positions
2BS4-0.75-0.84 Bin assignment -84.00 - -75.00 No other positions
2BS1-0.53-0.75 Bin assignment -75.00 - -53.00 No other positions
C-2BS1-0.53 Bin assignment -53.00 - 0.00 Wheat - SSR Loci (2005) - 2B Xbarc18 Marker 34.20 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 2B Xbarc160 Marker 34.30 (cM) Automated name-based View Maps
C2B Bin assignment -5.00 - 5.00 No other positions
C-2BL2-0.36 Bin assignment 0.00 - 36.00 No other positions
2BL2-0.36-0.50 Bin assignment 36.00 - 50.00 No other positions
2BL4-0.50-0.89 Bin assignment 50.00 - 86.00 No other positions
2BL6-0.89-1.00 Bin assignment 89.00 - 100.00 No other positions
2BS4-0.75-1.00 Bin assignment(level2) -100.00 - -75.00 Wheat - SSR Loci (2005) - 2B Xbarc200 Marker 8.40 (cM) Automated name-based View Maps
2BS3-0.84-0.53 Bin assignment(level2) -84.00 - -53.00 Wheat - SSR Loci (2005) - 2B Xbarc13 Marker 23.20 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 2B Xbarc7 Marker 24.10 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 2B Xbarc91 Marker 33.90 (cM) Automated name-based View Maps
2BL2-0.36-0.89 Bin assignment(level2) 36.00 - 89.00 Wheat - SSR Loci (2005) - 2B Xbarc128 Marker 40.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 2B Xbarc167 Marker 37.30 (cM) Automated name-based View Maps
2B/2BS Bin assignment(level3) -100.00 - 0.00 No other positions
2B/2BL Bin assignment(level3) 0.00 - 100.00 No other positions
C-2BS1-0.84* Bin assignment(level2) -84.00 - 0.00 No other positions
C-2BS4-0.75* Bin assignment(level2) -75.00 - 0.00 No other positions
2BS1-0.53-0.84* Bin assignment(level2) -84.00 - -53.00 No other positions
centromere Break point 0.00 No other positions
rice chr 4 Rice chromosome 4 -100.00 - -84.00 No other positions