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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Break point
Rice chromosome 1
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 3B
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
9 Bin assignment
7 Break point
8 Rice chromosome 1
24 Total

Map Features

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Items 1 to 24 of 24.
Wheat - Physical Bin Map - 3B
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
3BS-8 0.78 Break point -78.00 No other positions
3BS-9 0.57 Break point -57.00 No other positions
3BS-1 0.33 Break point -33.00 No other positions
3BL-2 0.22 Break point 22.00 No other positions
3BL-10 0.50 Break point 50.00 No other positions
3BL-7 0.63 Break point 63.00 No other positions
3BS8-0.78-1.00 Bin assignment -100.00 - -78.00 Wheat - SSR Loci (2005) - 3B Xbarc102 Marker 38.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 3B Xbarc133 Marker 15.60 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 3B Xbarc147 Marker 16.10 (cM) Automated name-based View Maps
3BS9-0.57-0.78 Bin assignment -78.00 - -57.00 Wheat - SSR Loci (2005) - 5B Xbarc156 Marker 104.30 (cM) Automated name-based View Maps
3BS1-0.33-0.57 Bin assignment -57.00 - -33.00 No other positions
C-3BS1-0.33 Bin assignment -33.00 - 0.00 No other positions
C3B Bin assignment -5.00 - 5.00 No other positions
C-3BL2-0.22 Bin assignment 0.00 - 22.00 Wheat - SSR Loci (2005) - 3B Xbarc77 Marker 108.80 (cM) Automated name-based View Maps
3BL2-0.22-0.50 Bin assignment 22.00 - 50.00 No other positions
3BL10-0.50-0.63 Bin assignment 50.00 - 63.00 Wheat - SSR Loci (2005) - 3B Xbarc164 Marker 81.50 (cM) Automated name-based View Maps
3BL7-0.63-1.00 Bin assignment 63.00 - 100.00 Wheat - SSR Loci (2005) - 3B Xbarc84 Marker 99.20 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr 1 Rice chromosome 1 -100.00 - -78.00 No other positions
rice chr 1 Rice chromosome 1 -78.00 - -57.00 No other positions
rice chr 1 Rice chromosome 1 -57.00 - -33.00 No other positions
rice chr 1 Rice chromosome 1 -33.00 - -5.00 No other positions
rice chr 1 Rice chromosome 1 5.00 - 22.00 No other positions
rice chr 1 Rice chromosome 1 22.00 - 50.00 No other positions
rice chr 1 Rice chromosome 1 50.00 - 63.00 No other positions
rice chr 1 Rice chromosome 1 63.00 - 100.00 No other positions