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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Rice chromosome 11
Rice chromosome 3
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 4B
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
8 Bin assignment
3 Bin assignment(level2)
6 Break point
2 Rice chromosome 11
5 Rice chromosome 3
24 Total

Map Features

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Items 1 to 24 of 24.
Wheat - Physical Bin Map - 4B
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
4BS-1 0.81 Break point -81.00 No other positions
4BS-8 0.57 Break point -57.00 No other positions
4BS-4 0.37 Break point -37.00 No other positions
4BL-1 0.71 Break point 71.00 No other positions
4BL-5 0.86 Break point 86.00 No other positions
4BS1-0.81-1.00 Bin assignment -100.00 - -81.00 No other positions
4BS8-0.57-0.81 Bin assignment -81.00 - -57.00 No other positions
4BS4-0.37-0.57 Bin assignment -57.00 - -37.00 No other positions
C-4BS4-0.37 Bin assignment -37.00 - 0.00 No other positions
C4B Bin assignment -5.00 - 5.00 No other positions
C-4BL1-0.71 Bin assignment 0.00 - 71.00 No other positions
4BL1-0.71-0.86 Bin assignment 71.00 - 86.00 No other positions
4BL5-0.86-1.00 Bin assignment 86.00 - 100.00 No other positions
4BS4-0.37-1.00 Bin assignment(level2) -100.00 - -37.00 Wheat - SSR Loci (2005) - 7B Xbarc20 Marker 133.20 (cM) Automated name-based View Maps
4BL1-0.71-1.00 Bin assignment(level2) 71.00 - 100.00 Wheat - SSR Loci (2005) - 4B Xbarc163 Marker 34.00 (cM) Automated name-based View Maps
C-4BL5-0.86 Bin assignment(level2) 0.00 - 86.00 Wheat - SSR Loci (2005) - 4B Xbarc60 Marker 38.10 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr 3 Rice chromosome 3 -100.00 - -81.00 No other positions
rice chr11 Rice chromosome 11 -81.00 - -57.00 No other positions
rice chr11 Rice chromosome 11 -57.00 - -37.00 No other positions
rice chr 3 Rice chromosome 3 -37.00 - -5.00 No other positions
rice chr 3 Rice chromosome 3 5.00 - 71.00 No other positions
rice chr 3 Rice chromosome 3 71.00 - 86.00 No other positions
rice chr 3 Rice chromosome 3 86.00 - 100.00 No other positions