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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Rice chromosome 11
Rice chromosome 11
Rice chromosome 12
Rice chromosome 3
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 4D
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
9 Bin assignment
2 Bin assignment(level2)
7 Break point
2 Rice chromosome 11
1 Rice chromosome 11
1 Rice chromosome 12
6 Rice chromosome 3
28 Total

Map Features

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Items 1 to 25 of 28.       of 2 | Next
Wheat - Physical Bin Map - 4D
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
6AL-8/1BL-2/4DS-2 0.82 Break point -82.00 No other positions
4DS-3 0.67 Break point -67.00 No other positions
4DS-1 0.53 Break point -53.00 No other positions
4DL-9 0.31 Break point 31.00 No other positions
4DL-13 0.56 Break point 56.00 No other positions
5DL-9/4DL-12 0.71 Break point 71.00 No other positions
4DS2-0.82-1.00 Bin assignment -100.00 - -82.00 No other positions
4DS3-0.67-0.82 Bin assignment -82.00 - -67.00 No other positions
4DS1-0.53-0.67 Bin assignment -67.00 - -53.00 Wheat - SSR Loci (2005) - 4D Xbarc98 Marker 41.20 (cM) Automated name-based View Maps
C-4DS1-0.53 Bin assignment -53.00 - 0.00 No other positions
C4D Bin assignment -5.00 - 5.00 No other positions
C-4DL9-0.31 Bin assignment 0.00 - 31.00 Wheat - SSR Loci (2005) - 5D Xbarc93 Marker 112.20 (cM) Automated name-based View Maps
4DL9-0.31-0.56 Bin assignment 31.00 - 56.00 No other positions
4DL13-0.56-0.71 Bin assignment 56.00 - 71.00 No other positions
4DL12-0.71-1.00 Bin assignment 71.00 - 100.00 No other positions
4DS3-0.67-1.00 Bin assignment(level2) -100.00 - -67.00 No other positions
4DL13-0.56-1.00 Bin assignment(level2) 56.00 - 100.00 No other positions
centromere Break point 0.00 No other positions
rice chr 3 Rice chromosome 3 -100.00 - -82.00 No other positions
rice chr 3 Rice chromosome 3 -82.00 - -67.00 No other positions
rice chr11 Rice chromosome 11 -67.00 - -53.00 No other positions
rice chr 12 Rice chromosome 12 -67.00 - -53.00 No other positions
rice chr11 Rice chromosome 11 -53.00 - -5.00 No other positions
rice chr 3 Rice chromosome 3 5.00 - 31.00 No other positions
rice chr11 Rice chromosome 11 5.00 - 31.00 No other positions