CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Rice chromosome 12
Rice chromosome 3
Rice chromosome 9
Rice chromosome 9
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 5A
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
10 Bin assignment
1 Bin assignment(level2)
8 Break point
3 Rice chromosome 12
3 Rice chromosome 3
2 Rice chromosome 9
1 Rice chromosome 9
28 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 28.       of 2 | Next
Wheat - Physical Bin Map - 5A
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
5AS-7 0.98 Break point -98.00 No other positions
5AS-3 0.75 Break point -75.00 No other positions
5DL-7/5AS-1 0.40 Break point -40.00 No other positions
5AL-12 0.35 Break point 35.00 No other positions
5AL-10 0.57 Break point 57.00 No other positions
5AL-17 0.78 Break point 78.00 No other positions
5AL-23 0.87 Break point 87.00 No other positions
5AS7/10-0.98-1.00 Bin assignment -100.00 - -98.00 No other positions
5AS3-0.75-0.98 Bin assignment -98.00 - -75.00 Wheat - SSR Loci (2005) - 5A Xbarc117 Marker 18.80 (cM) Automated name-based View Maps
5AS1-0.40-0.75 Bin assignment -75.00 - -40.00 No other positions
C-5AS1-0.40 Bin assignment -40.00 - 0.00 No other positions
C5A Bin assignment -5.00 - 5.00 No other positions
C-5AL12-0.35 Bin assignment 0.00 - 35.00 Wheat - SSR Loci (2005) - 5A Xbarc186 Marker 16.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 5D Xbarc144 Marker 163.80 (cM) Automated name-based View Maps
5AL12-0.35-0.57 Bin assignment 35.00 - 57.00 Wheat - SSR Loci (2005) - 5A Xbarc100 Marker 31.80 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 5A Xbarc165 Marker 40.30 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 5A Xbarc141 Marker 45.30 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 5A Xbarc1 Marker 34.20 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 5A Xbarc40 Marker 33.90 (cM) Automated name-based View Maps
5AL10-0.57-0.78 Bin assignment 57.00 - 78.00 Wheat - SSR Loci (2005) - 5A Xbarc151 Marker 64.00 (cM) Automated name-based View Maps
5AL17-0.78-0.87 Bin assignment 78.00 - 87.00 No other positions
5AL23-0.87-1.00 Bin assignment 87.00 - 100.00 No other positions
C-5AL10-0.57 Bin assignment(level2) 0.00 - 57.00 No other positions
centromere Break point 0.00 No other positions
rice chr 12 Rice chromosome 12 -98.00 - -75.00 No other positions
rice chr 12 Rice chromosome 12 -75.00 - -40.00 No other positions
rice chr 12 Rice chromosome 12 -40.00 - -5.00 No other positions
rice chr 9 Rice chromosome 9 5.00 - 35.00 No other positions
rice chr 9 Rice chromosome 9 35.00 - 57.00 No other positions
rice chr 3 Rice chromosome 3 57.00 - 78.00 No other positions