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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Break point
Rice chromosome 2
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 6A
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
7 Bin assignment
4 Bin assignment(level2)
5 Break point
2 Break point
6 Rice chromosome 2
24 Total

Map Features

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Items 1 to 24 of 24.
Wheat - Physical Bin Map - 6A
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
5AS-7/6AS-5 0.65 Break point -65.00 No other positions
6AS-1 0.35 Break point -35.00 No other positions
4BL-5/6AL-4 0.55 Break point 55.00 No other positions
6AL-8 0.90 Break point 90.00 No other positions
6AS5-0.65-1.00 Bin assignment -100.00 - -65.00 No other positions
6AS1-0.35-0.65 Bin assignment -65.00 - -35.00 No other positions
C-6AS1-0.35 Bin assignment -35.00 - 0.00 No other positions
C6A Bin assignment -5.00 - 5.00 No other positions
C-6AL4-0.55 Bin assignment 0.00 - 55.00 No other positions
6AL4-0.55-0.90 Bin assignment 55.00 - 90.00 No other positions
6AL8-0.90-1.00 Bin assignment 90.00 - 100.00 Wheat - SSR Loci (2005) - 6D Xbarc204 Marker 73.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6A Xbarc204 Marker 74.40 (cM) Automated name-based View Maps
6AS-1-0.35-1.00 Bin assignment(level2) -100.00 - -35.00 Wheat - SSR Loci (2005) - 6A Xbarc3 Marker 47.40 (cM) Automated name-based View Maps
6AL-4 0.55 Break point 55.00 No other positions
6AL-2 0.89 Break point 89.00 No other positions
C-6AL2-0.89 Bin assignment(level2) 0.00 - 89.00 Wheat - SSR Loci (2005) - 6A Xbarc113 Marker 66.10 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6A Xbarc107 Marker 67.30 (cM) Automated name-based View Maps
C-6AL4-0.55 Bin assignment(level2) 0.00 - 55.00 No other positions
6AL4-0.55-0.89 Bin assignment(level2) 55.00 - 89.00 Wheat - SSR Loci (2005) - 6A Xbarc171 Marker 58.00 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr2 Rice chromosome 2 -100.00 - -65.00 No other positions
rice chr2 Rice chromosome 2 -65.00 - -35.00 No other positions
rice chr2 Rice chromosome 2 -35.00 - -5.00 No other positions
rice chr2 Rice chromosome 2 5.00 - 55.00 No other positions
rice chr2 Rice chromosome 2 55.00 - 90.00 No other positions
rice chr2 Rice chromosome 2 90.00 - 100.00 No other positions