CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Break point
Rice chromosome 2
Unknown point bin assignment
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 6B
Map Start: -150.00 %
Map Stop: 100.00 %
Features by Type:
7 Bin assignment
1 Unknown point bin assignment
1 Bin assignment(level2)
4 Break point
1 Break point
6 Rice chromosome 2
20 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Wheat - Physical Bin Map - 6B
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
6BS-2, -3 1.05 Break point -105.00 No other positions
6BS-5 0.76 Break point -76.00 No other positions
1AS-4/6BL-3 0.36 Break point 36.00 No other positions
6BL-5 0.40 Break point 40.00 No other positions
6BS-Sat Bin assignment -150.00 - -105.00 Wheat - SSR Loci (2005) - 6B Xbarc134 Marker 71.00 (cM) Automated name-based View Maps
6BS5-0.76-1.05 Bin assignment -105.00 - -76.00 Wheat - SSR Loci (2005) - 6B Xbarc198 Marker 31.90 (cM) Automated name-based View Maps
C-6BS5-0.76 Bin assignment -76.00 - 0.00 No other positions
C6B Bin assignment -5.00 - 5.00 No other positions
C-6BL3-0.36 Bin assignment 0.00 - 36.00 No other positions
6BL3-0.36-0.40 Bin assignment 36.00 - 40.00 No other positions
6BL5-0.40-1.00 Bin assignment 40.00 - 100.00 No other positions
6BL-6 0.79 Break point 79.00 No other positions
6BL6-0.79-1.00 Bin assignment(level2) 79.00 - 100.00 Wheat - SSR Loci (2005) - 5A Xbarc180 Marker 11.10 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6B Xbarc24 Marker 54.70 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6B Xbarc79 Marker 44.60 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6B Xbarc178 Marker 57.40 (cM) Automated name-based View Maps
6BS5-0.76-0.90 Unknown point bin assignment -90.00 - -76.00 No other positions
rice chr2 Rice chromosome 2 -150.00 - -105.00 No other positions
rice chr2 Rice chromosome 2 -105.00 - -76.00 No other positions
rice chr2 Rice chromosome 2 -76.00 - -5.00 No other positions
rice chr2 Rice chromosome 2 5.00 - 36.00 No other positions
rice chr2 Rice chromosome 2 36.00 - 40.00 No other positions
rice chr2 Rice chromosome 2 40.00 - 100.00 No other positions