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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Break point
Rice chromosome 2
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 6D
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
11 Bin assignment
3 Bin assignment(level2)
9 Break point
2 Break point
10 Rice chromosome 2
35 Total

Map Features

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Items 1 to 25 of 35.       of 2 | Next
Wheat - Physical Bin Map - 6D
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
6DS-6 0.99 Break point -99.00 No other positions
6DS-4 0.79 Break point -79.00 No other positions
6DS-2 0.45 Break point -45.00 No other positions
6DL-6 0.29 Break point 29.00 No other positions
4AL-4/6DL-1 0.47 Break point 47.00 No other positions
6BS-3/6DL12 0.68 Break point 68.00 No other positions
5AS-10/1BL3/6DL11 0.74 Break point 74.00 No other positions
4AS-4/6DL10 0.80 Break point 80.00 No other positions
6DS6-0.99-1.00 Bin assignment -100.00 - -99.00 Wheat - SSR Loci (2005) - 6D Xbarc173 Marker 15.30 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6D Xbarc183 Marker 10.80 (cM) Automated name-based View Maps
6DS4-0.79-0.99 Bin assignment -99.00 - -79.00 No other positions
6DS2-0.45-0.79 Bin assignment -79.00 - -45.00 Wheat - SSR Loci (2005) - 6D Xbarc196 Marker 49.80 (cM) Automated name-based View Maps
C-6DS2-0.45 Bin assignment -45.00 - 0.00 No other positions
C6D Bin assignment -5.00 - 5.00 No other positions
C-6DL6-0.29 Bin assignment 0.00 - 29.00 Wheat - SSR Loci (2005) - 6D Xbarc23.1 Marker 57.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 6D Xbarc175 Marker 74.40 (cM) Automated name-based View Maps
6DL6-0.29-0.47 Bin assignment 29.00 - 47.00 No other positions
6DL1-0.47-0.68 Bin assignment 47.00 - 68.00 No other positions
6DL12-0.68-0.74 Bin assignment 68.00 - 74.00 No other positions
6DL11-0.74-0.80 Bin assignment 74.00 - 80.00 No other positions
6DL10-0.80-1.00 Bin assignment 80.00 - 100.00 No other positions
6DL-3 0.21 Break point 21.00 No other positions
6DL-4 0.35 Break point 35.00 No other positions
6DL3-0.21-0.35 Bin assignment(level2) 21.00 - 35.00 Wheat - SSR Loci (2005) - 6D Xbarc1121 Marker 75.90 (cM) Automated name-based View Maps
6DL3-0.21-1.00 Bin assignment(level2) 21.00 - 100.00 No other positions
6DL6-0.29-1.00 Bin assignment(level2) 29.00 - 100.00 Wheat - SSR Loci (2005) - 6D Xbarc21 Marker 111.30 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions