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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Bin assignment(level2)
Break point
Rice chromosome 6
Rice chromosome 8
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 7A
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
11 Bin assignment
3 Bin assignment(level2)
9 Break point
6 Rice chromosome 6
3 Rice chromosome 8
32 Total

Map Features

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Items 1 to 25 of 32.       of 2 | Next
Wheat - Physical Bin Map - 7A
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
2BL-2/7AS-1 0.89 Break point -89.00 No other positions
7AS-5 0.59 Break point -59.00 No other positions
7AS-8 0.45 Break point -45.00 No other positions
7AL-1 0.39 Break point 39.00 No other positions
7AS-8/7AL-17 0.71 Break point 71.00 No other positions
4AL-13/7AL-21 0.74 Break point 74.00 No other positions
3DS-3/5AS-8/7AL-16 0.86 Break point 86.00 No other positions
3DS-6/4AL11/7AL-18 0.90 Break point 90.00 No other positions
7AS1-0.89-1.00 Bin assignment -100.00 - -89.00 No other positions
7AS5-0.59-0.89 Bin assignment -89.00 - -59.00 Wheat - SSR Loci (2005) - 7A Xbarc222 Marker 54.10 (cM) Automated name-based View Maps
7AS8-0.45-0.59 Bin assignment -59.00 - -45.00 No other positions
C-7AS8-0.45 Bin assignment -45.00 - 0.00 No other positions
C7A Bin assignment -5.00 - 5.00 No other positions
C-7AL1-0.39 Bin assignment 0.00 - 39.00 Wheat - SSR Loci (2005) - 7A Xbarc108 Marker 71.90 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 7A Xbarc49 Marker 78.30 (cM) Automated name-based View Maps
7AL1-0.39-0.71 Bin assignment 39.00 - 71.00 No other positions
7AL17-0.71-0.74 Bin assignment 71.00 - 74.00 No other positions
7AL21-0.74-0.86 Bin assignment 74.00 - 86.00 No other positions
7AL16-0.86-0.90 Bin assignment 86.00 - 90.00 No other positions
7AL18-0.90-1.00 Bin assignment 90.00 - 100.00 No other positions
7AS5-0.59-1.00 Bin assignment(level2) -100.00 - -59.00 Wheat - SSR Loci (2005) - 7A Xbarc127 Marker 45.10 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 7A Xbarc64 Marker 54.80 (cM) Automated name-based View Maps
7AS8-0.45-7AL1-0.39 Bin assignment(level2) -45.00 - 39.00 No other positions
7AL1-0.39-1.00 Bin assignment(level2) 39.00 - 100.00 Wheat - SSR Loci (2005) - 7A Xbarc29 Marker 80.70 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr 6 Rice chromosome 6 -100.00 - -89.00 No other positions
rice chr 6 Rice chromosome 6 -89.00 - -59.00 No other positions