CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat-Physical Bin
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Bin assignment
Break point
Rice chromosome 6
Rice chromosome 8
Rice chromosome 8
Unknown point bin assignment
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Wheat - Physical Bin Map [ View Map Set Info ]
Map Name: 7D
Map Start: -100.00 %
Map Stop: 100.00 %
Features by Type:
8 Bin assignment
1 Unknown point bin assignment
6 Break point
5 Rice chromosome 6
2 Rice chromosome 8
1 Rice chromosome 8
23 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 23 of 23.
Wheat - Physical Bin Map - 7D
(Click headers to resort)		 Comparative Maps
Feature Type Position (%) Map Feature Type Position Evidence Actions
7DS-4 0.61 Break point -61.00 No other positions
7DS-5 0.36 Break point -36.00 No other positions
7DL-5 0.30 Break point 30.00 No other positions
7DL-2 0.61 Break point 61.00 No other positions
7DL-3 0.82 Break point 82.00 No other positions
7DS4-0.61-1.00 Bin assignment -100.00 - -61.00 No other positions
7DS5-0.36-0.61 Bin assignment -61.00 - -36.00 No other positions
C-7DS5-0.36 Bin assignment -36.00 - 0.00 Wheat - SSR Loci (2005) - 7D Xbarc125 Marker 37.50 (cM) Automated name-based View Maps
C7D Bin assignment -5.00 - 5.00 No other positions
C-7DL5-0.30 Bin assignment 0.00 - 30.00 Wheat - SSR Loci (2005) - 7D Xbarc26 Marker 64.10 (cM) Automated name-based View Maps
7DL5-0.30-0.61 Bin assignment 30.00 - 61.00 No other positions
7DL2-0.61-0.82 Bin assignment 61.00 - 82.00 No other positions
7DL3-0.82-1.00 Bin assignment 82.00 - 100.00 No other positions
7DS4-0.61 Unknown point bin assignment -80.00 - -61.00 Wheat - SSR Loci (2005) - 7D Xbarc126 Marker 37.50 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 7D Xbarc154 Marker 21.10 (cM) Automated name-based View Maps
Wheat - SSR Loci (2005) - 7D Xbarc214 Marker 49.20 (cM) Automated name-based View Maps
centromere Break point 0.00 No other positions
rice chr 6 Rice chromosome 6 -100.00 - -61.00 No other positions
rice chr 6 Rice chromosome 6 -61.00 - -36.00 No other positions
rice chr 8 Rice chromosome 8 -61.00 - -36.00 No other positions
rice chr 8 Rice chromosome 8 -36.00 - -5.00 No other positions
rice chr 8 Rice chromosome 8 5.00 - 30.00 No other positions
rice chr 6 Rice chromosome 6 30.00 - 61.00 No other positions
rice chr 6 Rice chromosome 6 61.00 - 82.00 No other positions
rice chr 6 Rice chromosome 6 82.00 - 100.00 No other positions